C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glyceraldehyde 3 phosphate dehydrogenase pseudogene 40
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000505218 GAPDHP40-001 ENSG00000248626 9606 - 5:159950493-159951498 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeHeartKidneyLiverLungTestisENST00000505218
Transcript ID Adipose Heart Kidney Liver Lung Testis
ENST00000505218 0.261±0.00 0.352±0.00 0.624±0.00 0.268±0.00 0.095±0.00 0.204±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100754 Gm2606-001 processed_pseudogene Mus_musculus 0 959
ENSMUST00000180167 Gm10359-001 processed_pseudogene Mus_musculus 0 953
ENSMUST00000119978 Gm12671-001 processed_pseudogene Mus_musculus 0 953
ENSMUST00000107041 Gm7336-201 processed_pseudogene Mus_musculus 0 953
ENSMUST00000073605 Gapdh-201 protein_coding Mus_musculus 0 953
ENSMUST00000118875 Gapdh-001 protein_coding Mus_musculus 0 953
ENSMUST00000117757 Gapdh-003 protein_coding Mus_musculus 0 953
ENSMUST00000180654 Gm12033-001 processed_pseudogene Mus_musculus 0 948
ENSMUST00000113842 Gm5138-001 processed_pseudogene Mus_musculus 0 948
ENSMUST00000119266 Gm12537-001 processed_pseudogene Mus_musculus 0 948
ENSMUST00000119551 Gm12070-001 processed_pseudogene Mus_musculus 0 948
ENSMUST00000180755 Gm5559-001 processed_pseudogene Mus_musculus 0 948
ENSMUST00000181051 Gm2574-001 processed_pseudogene Mus_musculus 0 948
ENSMUST00000179228 Gm10481-001 processed_pseudogene Mus_musculus 0 948
ENSMUST00000121658 Gm13394-001 processed_pseudogene Mus_musculus 0 944
ENSMUST00000121831 Gm14760-001 processed_pseudogene Mus_musculus 0 942
ENSMUST00000181181 Gm3272-001 processed_pseudogene Mus_musculus 0 942
ENSMUST00000180966 Gm20899-001 processed_pseudogene Mus_musculus 0 937
ENSMUST00000108740 Gm10358-201 processed_pseudogene Mus_musculus 0 937
ENSMUST00000120014 Gm13292-001 processed_pseudogene Mus_musculus 0 935
ENSMUST00000076317 Gm10293-001 processed_pseudogene Mus_musculus 0 931
ENSMUST00000106443 Gm4609-001 processed_pseudogene Mus_musculus 0 931
ENSMUST00000182581 Gm4335-001 processed_pseudogene Mus_musculus 0 928
ENSMUST00000166539 Gm2308-001 processed_pseudogene Mus_musculus 0 928
ENSMUST00000119246 Gm12286-001 processed_pseudogene Mus_musculus 0 926
ENSMUST00000145057 Gm10284-001 processed_pseudogene Mus_musculus 0 926
ENSMUST00000077127 Gm3839-201 processed_pseudogene Mus_musculus 0 926
ENSMUST00000181173 Gm3839-001 protein_coding Mus_musculus 0 926
ENSMUST00000181493 Gm3200-001 processed_pseudogene Mus_musculus 0 920
ENSMUST00000120886 Gm13882-001 processed_pseudogene Mus_musculus 0 920
ENSMUST00000182989 Gm4691-002 processed_transcript Mus_musculus 0 915
ENSMUST00000121760 Gm5863-001 processed_pseudogene Mus_musculus 0 915
ENSMUST00000071282 Gm3222-201 processed_pseudogene Mus_musculus 0 913
ENSMUST00000182339 Gm4691-001 transcribed_processed_pseudogene Mus_musculus 0 909
ENSMUST00000086739 Gm10566-001 processed_pseudogene Mus_musculus 0 900
ENSMUST00000122433 Gm14148-001 processed_pseudogene Mus_musculus 0 898
ENSMUST00000183053 Gm7507-001 processed_pseudogene Mus_musculus 0 893
ENSMUST00000105222 Gm10327-001 processed_pseudogene Mus_musculus 0 893
ENSMUST00000182991 Gm4575-001 processed_pseudogene Mus_musculus 0 887
ENSMUST00000094175 Gm10291-201 processed_pseudogene Mus_musculus 0 887
ENSMUST00000087222 Gm3695-001 processed_pseudogene Mus_musculus 0 887
ENSMUST00000091897 Gm5507-001 processed_pseudogene Mus_musculus 0 881
ENSMUST00000182522 Gm3534-001 processed_pseudogene Mus_musculus 0 880
ENSMUST00000089534 Gm7293-201 protein_coding Mus_musculus 0 872
ENSMUST00000120911 Gm12416-001 processed_pseudogene Mus_musculus 0 870
ENSMUST00000118655 Gm12182-001 processed_pseudogene Mus_musculus 0 865
ENSMUST00000182720 Gm8349-001 processed_pseudogene Mus_musculus 0 865
ENSMUST00000099956 Gm8055-001 processed_pseudogene Mus_musculus 0 859
ENSMUST00000050581 Gm5069-002 protein_coding Mus_musculus 0 854
ENSMUST00000182463 Gm3671-001 processed_pseudogene Mus_musculus 0 852
ENSMUST00000182630 Gm2546-001 processed_pseudogene Mus_musculus 0 848
ENSMUST00000182798 Gm2445-001 processed_pseudogene Mus_musculus 0 846
ENSMUST00000117933 Gm15191-001 processed_pseudogene Mus_musculus 0 846
ENSMUST00000117732 Gm11185-001 processed_pseudogene Mus_musculus 0 846
ENSMUST00000182661 Gm7251-001 processed_pseudogene Mus_musculus 0 846
ENSMUST00000182456 Gm16470-001 processed_pseudogene Mus_musculus 0 830
ENSMUST00000182565 Gm8825-001 processed_pseudogene Mus_musculus 0 828
ENSMUST00000095717 Gm4795-001 processed_pseudogene Mus_musculus 0 828
ENSMUST00000182336 Gm5652-001 processed_pseudogene Mus_musculus 0 826
ENSMUST00000119851 Gm14111-001 processed_pseudogene Mus_musculus 0 824
ENSMUST00000182691 Gm7286-001 processed_pseudogene Mus_musculus 0 824
ENSMUST00000182243 Gm4217-001 processed_pseudogene Mus_musculus 0 819
ENSMUST00000095320 Gm10313-001 processed_pseudogene Mus_musculus 0 815
ENSMUST00000182266 Gm2467-001 processed_pseudogene Mus_musculus 0 815
ENSMUST00000183305 Gm4654-001 processed_pseudogene Mus_musculus 0 813
ENSMUST00000183246 Gm2193-001 processed_pseudogene Mus_musculus 0 806
ENSMUST00000117402 Gm7129-001 processed_pseudogene Mus_musculus 0 804
ENSMUST00000118182 Gm5944-001 processed_pseudogene Mus_musculus 0 802
ENSMUST00000082064 Gm6316-001 processed_pseudogene Mus_musculus 0 798
ENSMUST00000183250 Gm8756-001 processed_pseudogene Mus_musculus 0 791
ENSMUST00000118417 Gm14130-001 processed_pseudogene Mus_musculus 0 789
ENSMUST00000122352 Gm11953-001 processed_pseudogene Mus_musculus 0 787
ENSMUST00000183272 Gapdh-017 protein_coding Mus_musculus 0 785
ENSMUST00000182449 Gm6944-001 processed_pseudogene Mus_musculus 0 784
ENSMUST00000122453 Gm12017-001 processed_pseudogene Mus_musculus 0 782
ENSMUST00000182524 Gm2076-001 processed_pseudogene Mus_musculus 0 780
ENSMUST00000133495 3000002C10Rik-001 transcribed_processed_pseudogene Mus_musculus 0 776
ENSMUST00000125451 3000002C10Rik-003 processed_transcript Mus_musculus 0 776
ENSMUST00000144161 3000002C10Rik-002 processed_transcript Mus_musculus 0 776
ENSMUST00000182754 Gm8330-001 processed_pseudogene Mus_musculus 0 776
ENSMUST00000182525 Gm5430-001 processed_pseudogene Mus_musculus 0 769
ENSMUST00000182599 Gm6967-001 processed_pseudogene Mus_musculus 0 761
ENSMUST00000183076 Gm5345-001 processed_pseudogene Mus_musculus 0 752
ENSMUST00000180415 Gm5523-001 processed_pseudogene Mus_musculus 0 745
ENSMUST00000182346 Gm9081-001 processed_pseudogene Mus_musculus 0 743
ENSMUST00000182705 Gm8343-001 processed_pseudogene Mus_musculus 0 736
ENSMUST00000182150 Gm5210-001 processed_pseudogene Mus_musculus 0 726
ENSMUST00000182954 Gm8318-001 processed_pseudogene Mus_musculus 0 723
ENSMUST00000182596 Gm5732-001 processed_pseudogene Mus_musculus 0 723
ENSMUST00000183329 Gm7985-001 processed_pseudogene Mus_musculus 0 717
ENSMUST00000182369 Gm6283-001 processed_pseudogene Mus_musculus 0 713
ENSMUST00000182893 Gm5313-001 processed_pseudogene Mus_musculus 0 704
ENSMUST00000182170 Gm4819-001 processed_pseudogene Mus_musculus 0 702
ENSMUST00000118148 Gm13592-001 processed_pseudogene Mus_musculus 0 701
ENSMUST00000183064 Gm7497-001 processed_pseudogene Mus_musculus 0 693
ENSMUST00000181978 Gm8927-001 processed_pseudogene Mus_musculus 0 693
ENSMUST00000118675 Gm12684-001 processed_pseudogene Mus_musculus 0 689
ENSMUST00000153034 Gm10364-001 transcribed_processed_pseudogene Mus_musculus 0 686
ENSMUST00000076633 Gm10364-002 processed_transcript Mus_musculus 0 686
ENSMUST00000183020 Gm5710-001 processed_pseudogene Mus_musculus 0 686
ENSMUST00000064353 Gm8174-001 processed_pseudogene Mus_musculus 0 686
ENSMUST00000182757 Gm9658-001 processed_pseudogene Mus_musculus 0 678
ENSMUST00000182329 Gm7611-001 processed_pseudogene Mus_musculus 0 675
ENSMUST00000183288 Gm7833-001 processed_pseudogene Mus_musculus 0 675
ENSMUST00000121385 Gm12464-001 processed_pseudogene Mus_musculus 0 673
ENSMUST00000118643 Gm14921-001 processed_pseudogene Mus_musculus 0 671
ENSMUST00000183049 Gm5787-001 processed_pseudogene Mus_musculus 0 669
ENSMUST00000182830 Gm8513-001 processed_pseudogene Mus_musculus 0 669
ENSMUST00000182638 Gm4518-001 processed_pseudogene Mus_musculus 0 665
ENSMUST00000182240 Gm8907-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000119237 Gm13668-001 processed_pseudogene Mus_musculus 0 643
ENSMUST00000182237 Gm6946-001 processed_pseudogene Mus_musculus 0 632
ENSMUST00000182418 Gm7069-001 processed_pseudogene Mus_musculus 0 630
ENSMUST00000182176 Gm26956-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000182279 Gm4891-001 processed_pseudogene Mus_musculus 0 623
ENSMUST00000122032 Gm7150-001 processed_pseudogene Mus_musculus 0 616
ENSMUST00000121515 Gm13466-001 processed_pseudogene Mus_musculus 0 606
ENSMUST00000182678 Gm7191-001 processed_pseudogene Mus_musculus 0 604
ENSMUST00000180655 Gm5262-001 processed_pseudogene Mus_musculus 0 604
ENSMUST00000183257 Gm7693-001 processed_pseudogene Mus_musculus 0 601
ENSMUST00000182882 Gm9211-001 processed_pseudogene Mus_musculus 0 599
ENSMUST00000182253 Gm5205-001 processed_pseudogene Mus_musculus 0 580
ENSMUST00000182482 Gm9022-001 transcribed_processed_pseudogene Mus_musculus 0 562
ENSMUST00000182081 Gm9162-001 processed_pseudogene Mus_musculus 0 558
ENSMUST00000122157 Gm12634-001 processed_pseudogene Mus_musculus 0 558
ENSMUST00000181525 Gm5706-001 processed_pseudogene Mus_musculus 0 556
ENSMUST00000183067 Gm9358-001 processed_pseudogene Mus_musculus 0 555
ENSMUST00000119554 Gm9439-001 processed_pseudogene Mus_musculus 0 549
ENSMUST00000182963 Gm9135-001 processed_pseudogene Mus_musculus 0 542
ENSMUST00000182730 Gm5272-001 processed_pseudogene Mus_musculus 0 481
ENSMUST00000120728 Gm16177-001 processed_pseudogene Mus_musculus 0 479
ENSMUST00000182468 Gm7656-001 processed_pseudogene Mus_musculus 0 446
ENSMUST00000181461 Gm2383-001 processed_pseudogene Mus_musculus 0 416
ENSMUST00000182270 Gm27037-001 processed_pseudogene Mus_musculus 0 383
ENSMUST00000182326 Gm8254-001 processed_pseudogene Mus_musculus 0 372
ENSMUST00000118893 Gm15957-001 processed_pseudogene Mus_musculus 0 342
ENSMUST00000182394 Gm9522-001 processed_pseudogene Mus_musculus 0 316
ENSMUST00000183270 Gm17799-001 processed_pseudogene Mus_musculus 0 315
ENSMUST00000159905 Gm16296-001 processed_pseudogene Mus_musculus 0 303
ENSMUST00000187802 RP24-369P14.2-001 processed_pseudogene Mus_musculus 0 298
ENSMUST00000182938 Gm9556-001 processed_pseudogene Mus_musculus 0 294
ENSMUST00000182962 Gm8824-001 processed_pseudogene Mus_musculus 0 289
ENSMUST00000147954 Gapdh-006 retained_intron Mus_musculus 0 283
ENSMUST00000097296 Gm17199-001 processed_pseudogene Mus_musculus 0 270
ENSMUST00000183172 Gm26963-001 processed_pseudogene Mus_musculus 0 263
ENSMUST00000121380 Gm12297-001 processed_pseudogene Mus_musculus 0 213
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 1.00053e-42 178
ENSMUST00000121154 Gm15349-001 processed_pseudogene Mus_musculus 3e-33 147
ENSMUST00000121919 Gm14491-001 processed_pseudogene Mus_musculus 1e-32 145
ENSMUST00000186767 RP24-468E2.1-001 unprocessed_pseudogene Mus_musculus 5e-26 122
ENSMUST00000117918 Gm14550-001 processed_pseudogene Mus_musculus 1e-16 92

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