C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pantothenate kinase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000505228 PANK4-009 ENSG00000157881 9606 - 1:2508795-2520901 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000505228
Transcript ID Adrenal Bladder Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000505228 2.518±0.00 0.355±0.00 1.094±0.44 2.436±0.00 3.797±0.00 3.781±0.00 1.397±0.00 2.968±0.54 2.833±0.58 3.243±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QV CIL_0007QV_0001 VISTA 1:1910870-2513425

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004594 IEA pantothenate kinase activity
GO:0005524 IEA ATP binding
GO:0015937 IEA coenzyme A biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000148934 Pank4-003 nonsense_mediated_decay Mus_musculus 0 1855
ENSMUST00000070953 Pank4-002 protein_coding Mus_musculus 0 1384
ENSMUST00000030931 Pank4-001 protein_coding Mus_musculus 0 1384
ENSMUST00000105632 Pank4-004 retained_intron Mus_musculus 0 593
ENSDART00000124139 pank4-201 protein_coding Danio_rerio 0 582
ENSMUST00000129386 Pank4-005 retained_intron Mus_musculus 4e-29 134
ENSMUST00000128297 Pank4-007 retained_intron Mus_musculus 4e-29 134
ENSMUST00000148299 Pank4-006 retained_intron Mus_musculus 4e-29 134

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