C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | syntaxin 18 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000505286  |
STX18-002 |
ENSG00000168818 |
9606 | - |
4:4415742-4542010  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008ZA | CIL_0008ZA_0001 | VISTA | 4:4157066-4757929 |
| CIL_00096M | CIL_00096M_0001 | VISTA | 4:4215001-4816750 |
| CIL_0008QQ | CIL_0008QQ_0001 | VISTA | 4:4221140-4822323 |
| CIL_00096B | CIL_00096B_0001 | VISTA | 4:4365944-4967466 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005484 | IEA | SNAP receptor activity |
| GO:0006886 | IEA | intracellular protein transport |
| GO:0016020 | IEA | membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000114126
|
Stx18-001 | protein_coding | Mus_musculus | 0 | 1118 |
|
ENSMUST00000031008
|
Stx18-005 | protein_coding | Mus_musculus | 0 | 1116 |
|
ENSMUST00000154929
|
Stx18-003 | protein_coding | Mus_musculus | 0 | 785 |
|
ENSMUST00000146864
|
Stx18-002 | processed_transcript | Mus_musculus | 0 | 678 |
|
ENSMUST00000042146
|
Stx18-004 | protein_coding | Mus_musculus | 0 | 499 |
