C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ISL LIM homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000505475 ISL1-006 ENSG00000016082 9606 + 5:51386204-51393567 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonLungENST00000505475
Transcript ID Adipose Adrenal Breast Colon Lung
ENST00000505475 0.024±0.00 0.015±0.00 0.031±0.00 0.712±0.00 0.104±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009BI CIL_0009BI_0001 VISTA 5:50795065-51396423
CIL_000931 CIL_000931_0001 VISTA 5:50872116-51474155
CIL_0008U0 CIL_0008U0_0001 VISTA 5:50885638-51486644
CIL_0007JG CIL_0007JG_0001 UCNEbase 5:51039710-52466387
CIL_000918 CIL_000918_0001 VISTA 5:51111733-51713370
CIL_0008KS CIL_0008KS_0001 VISTA 5:51258610-51860379
CIL_00083D CIL_00083D_0001 VISTA 5:51364298-51965733

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036060 Isl1-001 protein_coding Mus_musculus 0 1105
ENSMUST00000176812 Isl1-004 processed_transcript Mus_musculus 0 765
ENSMUST00000176044 Isl1-002 protein_coding Mus_musculus 0 763
ENSMUST00000176444 Isl1-005 retained_intron Mus_musculus 0 749

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