Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	heat shock protein 90kDa alpha (cytosolic), class B member 3, pseudogene
ENST00000505987	HSP90AB3P-001	ENSG00000183199	9606	+	4:87891843-87894015	processed_pseudogene

Expression Patterns

Transcript ID	Adipose	Adrenal	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENST00000505987	0.084±0.00	0.123±0.00	0.228±0.15	0.081±0.06	0.150±0.14	0.050±0.04	0.111±0.00	0.035±0.00	0.097±0.04	0.165±0.15	0.053±0.04	0.030±0.01	0.118±0.09

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0000BJ	CIL_0000BJ_0001	CGP	4:87821411-87983426

Gene Ontology
GO ID	Evidence Type	GO Description
No GO terms available.

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000024739	Hsp90ab1-001	protein_coding	Mus_musculus	0	2628
ENSMUST00000119727	Gm6368-001	processed_pseudogene	Mus_musculus	0	2084
ENSMUST00000119159	Gm13498-001	processed_pseudogene	Mus_musculus	0	2065
ENSDART00000020084	hsp90ab1-001	protein_coding	Danio_rerio	0	1489
ENSDART00000129014	hsp90ab1-201	protein_coding	Danio_rerio	0	1029
ENSMUST00000166469	Hsp90ab1-006	protein_coding	Mus_musculus	0	678
ENSMUST00000146770	Hsp90ab1-004	retained_intron	Mus_musculus	0	534
ENSMUST00000145205	Hsp90ab1-005	retained_intron	Mus_musculus	0	470
ENSMUST00000151306	Hsp90ab1-003	retained_intron	Mus_musculus	0	412
ENSMUST00000163966	Hsp90ab1-007	nonsense_mediated_decay	Mus_musculus	0	361
ENSMUST00000130406	Hsp90ab1-002	protein_coding	Mus_musculus	0	335
ENSMUST00000117774	Gm14107-001	processed_pseudogene	Mus_musculus	0	285
ENSMUST00000165127	Hsp90ab1-008	protein_coding	Mus_musculus	0	215
ENSMUST00000118187	Gm11875-001	processed_pseudogene	Mus_musculus	2e-38	165

Loading