C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000506559 RP13-644M16.1-001 ENSG00000251284 9606 + 4:69125274-69126451 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyOvaryTestisENST00000506559
Transcript ID Kidney Ovary Testis
ENST00000506559 0.332±0.00 0.014±0.00 0.007±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002BJ CIL_0002BJ_000D CGP 4:68928463-69214731
CIL_0002BJ CIL_0002BJ_000K CGP 4:69004618-69214731
CIL_0002BJ CIL_0002BJ_000G CGP 4:69051363-69423402

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000132484 Spopl-001 protein_coding Mus_musculus 0 1194
ENSMUST00000132827 Spopl-002 processed_transcript Mus_musculus 0 765
ENSMUST00000028110 Spopl-005 processed_transcript Mus_musculus 0 765
ENSDART00000011922 spopla-001 protein_coding Danio_rerio 0 329
ENSDART00000129143 spopla-201 protein_coding Danio_rerio 0 302
ENSMUST00000136290 Spopl-004 processed_transcript Mus_musculus 0 248
ENSMUST00000123843 Spopl-003 processed_transcript Mus_musculus 3.99931e-42 176

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