C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal recognition particle 72kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000507126 SRP72-004 ENSG00000174780 9606 + 4:56500512-56503680 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000507126
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000507126 3.252±0.00 6.812±0.00 5.463±0.00 4.781±0.00 4.241±0.00 2.220±0.00 8.239±0.00 4.552±0.00 5.258±0.00 1.958±0.00 7.517±0.47 6.714±0.27 5.776±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008G9 CIL_0008G9_0001 VISTA 4:56396035-56999166
CIL_0001WO CIL_0001WO_0001 CGP 4:56435741-56503680
CIL_0001WL CIL_0001WL_0001 CGP 4:56466915-56524448

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000132860 Srp72-004 retained_intron Mus_musculus 0 568
ENSMUST00000120550 Srp72-002 protein_coding Mus_musculus 0 568
ENSMUST00000101087 Srp72-001 protein_coding Mus_musculus 0 568
ENSMUST00000144741 Srp72-009 retained_intron Mus_musculus 0 235
ENSMUST00000146167 Srp72-008 retained_intron Mus_musculus 5e-24 117

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