C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: factor interacting with PAPOLA and CPSF1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000507166 FIP1L1-005 ENSG00000145216 9606 + 4:53377839-54295272 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RT CIL_0008RT_0001 VISTA 4:52776116-53378130
CIL_0001CS CIL_0001CS_0001 CGP 4:52872982-54295272
CIL_0007V9 CIL_0007V9_0001 VISTA 4:52895307-53499113
CIL_0001CL CIL_0001CL_0001 CGP 4:53377643-54295272

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0004714 IEA transmembrane receptor protein tyrosine kinase activity
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0006397 IEA mRNA processing
GO:0006468 IEA protein phosphorylation
GO:0007169 IEA transmembrane receptor protein tyrosine kinase signaling pathway
GO:0016021 IEA integral component of membrane
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168162 Pdgfra-202 protein_coding Mus_musculus 0 1953
ENSMUST00000000476 Pdgfra-201 protein_coding Mus_musculus 0 1953
ENSMUST00000121950 Fip1l1-008 protein_coding Mus_musculus 0 1461
ENSMUST00000113534 Fip1l1-007 protein_coding Mus_musculus 0 1461
ENSMUST00000120618 Fip1l1-005 protein_coding Mus_musculus 0 1269
ENSMUST00000113535 Fip1l1-004 protein_coding Mus_musculus 0 907
ENSMUST00000113536 Fip1l1-003 protein_coding Mus_musculus 0 907
ENSMUST00000080164 Fip1l1-001 protein_coding Mus_musculus 0 907
ENSMUST00000122245 Fip1l1-006 protein_coding Mus_musculus 0 717
ENSDART00000028255 pdgfrb-201 protein_coding Danio_rerio 1.4013e-45 189
ENSMUST00000135377 Fip1l1-010 retained_intron Mus_musculus 4e-30 137
ENSDART00000081357 flt3-001 protein_coding Danio_rerio 5e-20 104

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