C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000507750 KCNN2-005 ENSG00000080709 9606 + 5:114363107-114495946 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaENST00000507750
Transcript ID Ovary Placenta
ENST00000507750 0.067±0.00 0.074±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UP CIL_0004UP_0001 CGP 5:113513683-114496640
CIL_0004UO CIL_0004UO_0001 CGP 5:114360945-115180546

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169783 Kcnn2-202 protein_coding Mus_musculus 0 1109
ENSMUST00000066890 Kcnn2-201 protein_coding Mus_musculus 0 717
ENSMUST00000183850 Kcnn2-001 protein_coding Mus_musculus 0 717
ENSMUST00000184101 Kcnn2-003 retained_intron Mus_musculus 0 412
ENSMUST00000167895 Kcnn2-002 processed_transcript Mus_musculus 0 405
ENSMUST00000183897 Kcnn2-004 retained_intron Mus_musculus 0 403
ENSDART00000033922 kcnn1a-001 protein_coding Danio_rerio 0 375
ENSDART00000141221 KCNN2-001 protein_coding Danio_rerio 0 195

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