C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock 70kDa protein 4-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000508776 HSPA4L-003 ENSG00000164070 9606 + 4:127781821-127833042 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyLungOvaryPlacentaTestisENST00000508776
Transcript ID Brain Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000508776 4.684±0.00 2.047±0.00 0.854±0.31 4.081±0.00 1.062±0.00 0.658±0.45 0.238±0.12 46.094±7.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RF CIL_0008RF_0001 VISTA 4:127185130-127786590
CIL_0007AI CIL_0007AI_0001 CGP 4:127730378-127840733
CIL_0007AJ CIL_0007AJ_0001 CGP 4:127781821-127899195

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000902 IEA cell morphogenesis
GO:0005524 ISS ATP binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0005829 IDA cytosol
GO:0006457 ISS protein folding
GO:0006986 ISS response to unfolded protein

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000077083 Hspa4l-001 protein_coding Mus_musculus 0 3068
ENSMUST00000108086 Hspa4l-004 protein_coding Mus_musculus 0 2916
ENSMUST00000159819 Hspa4l-003 protein_coding Mus_musculus 0 2091
ENSMUST00000161806 Hspa4l-002 retained_intron Mus_musculus 0 579
ENSMUST00000160026 Hspa4l-007 retained_intron Mus_musculus 0 560
ENSMUST00000162279 Hspa4l-005 protein_coding Mus_musculus 0 503

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