C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock 70kDa protein 8 pseudogene 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000508840 HSPA8P11-001 ENSG00000248159 9606 + 8:30237382-30240997 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000508840
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000508840 0.058±0.00 0.064±0.00 0.041±0.00 0.038±0.00 0.027±0.00 0.034±0.00 0.164±0.00 0.006±0.00 0.017±0.00 0.047±0.03 0.038±0.01 0.116±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D0 CIL_0008D0_0001 VISTA 8:29977526-30581393
CIL_0008IH CIL_0008IH_0001 VISTA 8:30111104-30714589

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000188705 RP23-76C10.2-001 processed_pseudogene Mus_musculus 0 902
ENSMUST00000120949 Gm9436-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000117405 Gm15459-001 processed_pseudogene Mus_musculus 0 448
ENSMUST00000117557 Hspa8-003 protein_coding Mus_musculus 0 442
ENSMUST00000015800 Hspa8-001 protein_coding Mus_musculus 0 442
ENSMUST00000177767 Gm8355-201 processed_pseudogene Mus_musculus 0 431
ENSMUST00000187358 RP23-241J21.1-001 processed_pseudogene Mus_musculus 0 398
ENSMUST00000118350 Gm15604-001 processed_pseudogene Mus_musculus 0 311
ENSMUST00000149936 Hspa8-002 retained_intron Mus_musculus 9.80909e-45 185

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