C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: single-stranded DNA binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000508912 SSBP2-016 ENSG00000145687 9606 - 5:81636472-81751016 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000508912
Transcript ID Muscle
ENST00000508912 11.612±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005TJ CIL_0005TJ_0002 CGP 5:81330005-81751797
CIL_0005TK CIL_0005TK_0002 CGP 5:81413021-82276857

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042122 Ssbp2-004 protein_coding Mus_musculus 0 283
ENSMUST00000137493 Ssbp2-003 retained_intron Mus_musculus 0 283
ENSMUST00000144659 Ssbp2-002 retained_intron Mus_musculus 0 283
ENSMUST00000004094 Ssbp2-001 protein_coding Mus_musculus 0 283
ENSMUST00000138488 Ssbp2-007 nonsense_mediated_decay Mus_musculus 1.4013e-45 185
ENSMUST00000141381 Ssbp2-005 retained_intron Mus_musculus 1.4013e-45 185

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