C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000509131 CTC-431G16.3-001 ENSG00000238254 9606 - 5:79849552-79849846 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00077C CIL_00077C_0002 CGP 5:79689877-79991262

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121321 Rpl10-ps6-001 processed_pseudogene Mus_musculus 0 204
ENSMUST00000119438 Rpl10-ps1-001 transcribed_processed_pseudogene Mus_musculus 0 198
ENSMUST00000074085 Rpl10-002 protein_coding Mus_musculus 0 198
ENSMUST00000008826 Rpl10-001 protein_coding Mus_musculus 0 198
ENSMUST00000076364 Rpl10-ps3-201 protein_coding Mus_musculus 0 198
ENSMUST00000151702 Rpl10-003 protein_coding Mus_musculus 1.4013e-45 185
ENSMUST00000121144 Gm11450-001 processed_pseudogene Mus_musculus 1.00053e-42 176
ENSMUST00000081908 Rpl10l-001 protein_coding Mus_musculus 9.99967e-42 172
ENSMUST00000187303 RP23-435I22.2-001 processed_pseudogene Mus_musculus 4.99997e-41 171
ENSMUST00000076465 Gm5621-201 processed_pseudogene Mus_musculus 4.99997e-41 171
ENSMUST00000121511 Gm14460-001 processed_pseudogene Mus_musculus 2e-40 169
ENSMUST00000098432 Rpl10-ps2-201 processed_pseudogene Mus_musculus 2e-35 152
ENSMUST00000117120 Rpl10-ps4-001 processed_pseudogene Mus_musculus 4e-32 141
ENSMUST00000122145 Gm11688-001 processed_pseudogene Mus_musculus 2e-29 132
ENSMUST00000117198 Gm14056-001 processed_pseudogene Mus_musculus 2e-29 132
ENSMUST00000135690 Rpl10-011 protein_coding Mus_musculus 4e-27 124
ENSMUST00000134330 Rpl10-009 retained_intron Mus_musculus 3e-23 111
ENSMUST00000125775 Rpl10-005 retained_intron Mus_musculus 3e-18 95
ENSMUST00000146584 Rpl10-010 retained_intron Mus_musculus 0.000000000000006 84
ENSMUST00000149171 Rpl10-004 processed_transcript Mus_musculus 0.0000004 58
ENSMUST00000120307 Gm14394-001 processed_pseudogene Mus_musculus 0.000001 57

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