C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 172, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000509163 FAM172A-005 ENSG00000113391 9606 - 5:93620929-94111676 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000509163
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000509163 3.481±0.00 5.470±0.00 7.723±0.00 5.840±0.00 2.915±0.00 2.060±0.00 7.245±0.00 9.286±0.00 1.185±0.50 2.553±1.27 2.190±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007N1 CIL_0007N1_0003 UCNEbase 5:93009012-93909237
CIL_0008KX CIL_0008KX_0001 VISTA 5:93105796-93709037
CIL_00083A CIL_00083A_0001 VISTA 5:93175759-93777511
CIL_0005KH CIL_0005KH_0002 CGP 5:93583337-94111699
CIL_0008SK CIL_0008SK_0001 VISTA 5:93591279-94192616
CIL_0004Z9 CIL_0004Z9_0001 CGP 5:93618069-94111699

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005576 IEA extracellular region
GO:0005783 IDA endoplasmic reticulum

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000091459 Fam172a-201 protein_coding Mus_musculus 0 1585
ENSMUST00000163257 Fam172a-203 protein_coding Mus_musculus 0 1458
ENSMUST00000099358 Fam172a-202 protein_coding Mus_musculus 0 797

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