C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tropomyosin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000509601 TPM3-020 ENSG00000143549 9606 - 1:154170408-154183208 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENST00000509601
Transcript ID Kidney
ENST00000509601 21.495±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029549 Tpm3-003 protein_coding Mus_musculus 0 427
ENSMUST00000118566 Tpm3-004 protein_coding Mus_musculus 0 414
ENSMUST00000131354 Tpm3-006 retained_intron Mus_musculus 0 401
ENSMUST00000147430 Tpm3-011 retained_intron Mus_musculus 0 401
ENSMUST00000072359 Tpm3-rs7-201 protein_coding Mus_musculus 0 396
ENSMUST00000119158 Tpm3-005 protein_coding Mus_musculus 0 368
ENSMUST00000062193 Tpm3-201 protein_coding Mus_musculus 0 307
ENSMUST00000119570 Tpm3-001 protein_coding Mus_musculus 0 307
ENSMUST00000149734 Tpm3-014 retained_intron Mus_musculus 0 265
ENSMUST00000121503 Tpm3-002 protein_coding Mus_musculus 0 198
ENSMUST00000143281 Tpm3-015 retained_intron Mus_musculus 0 196
ENSMUST00000133361 Tpm3-013 retained_intron Mus_musculus 1e-24 117
ENSMUST00000133281 Tpm3-010 retained_intron Mus_musculus 1e-24 117

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