C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: alpha-kinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000509722 ALPK1-008 ENSG00000073331 9606 + 4:112297380-112441371 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartLiverMuscleTestisENST00000509722
Transcript ID Breast Heart Liver Muscle Testis
ENST00000509722 0.841±0.08 0.368±0.00 0.479±0.00 0.760±0.00 0.425±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007P9 CIL_0007P9_0001 UCNEbase 4:110617607-112523533
CIL_00080F CIL_00080F_0001 VISTA 4:111826456-112428336
CIL_0008WR CIL_0008WR_0001 VISTA 4:112221234-112822374

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029662 Alpk1-001 protein_coding Mus_musculus 0 1181
ENSMUST00000160586 Alpk1-003 retained_intron Mus_musculus 0 965
ENSMUST00000159720 Alpk1-005 protein_coding Mus_musculus 0 501

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