C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ligand dependent nuclear receptor corepressor-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000510451 LCORL-004 ENSG00000178177 9606 - 4:17845497-18021757 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverLungMuscleENST00000510451
Transcript ID Brain Liver Lung Muscle
ENST00000510451 1.307±0.00 2.166±0.00 2.524±0.00 1.516±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002OQ CIL_0002OQ_0001 CGP 4:17810902-18021876
CIL_0002OP CIL_0002OP_0001 CGP 4:17841199-20620561

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000190036 Lcorl-007 protein_coding Mus_musculus 0 857
ENSMUST00000186633 Lcorl-008 nonsense_mediated_decay Mus_musculus 0 617
ENSMUST00000087164 Lcorl-005 protein_coding Mus_musculus 0 568
ENSMUST00000016026 Lcorl-002 protein_coding Mus_musculus 0 568
ENSMUST00000121573 Lcorl-004 protein_coding Mus_musculus 0 568
ENSMUST00000045586 Lcorl-001 protein_coding Mus_musculus 0 568
ENSMUST00000156295 Lcorl-006 retained_intron Mus_musculus 0 387
ENSMUST00000067997 Lcorl-003 protein_coding Mus_musculus 0 383
ENSMUST00000187615 Lcorl-009 nonsense_mediated_decay Mus_musculus 0 320
ENSMUST00000189859 Lcorl-010 protein_coding Mus_musculus 0 316

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