C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cysteine-rich hydrophobic domain 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000510894 CHIC2-005 ENSG00000109220 9606 - 4:54009979-54064298 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonKidneyLiverLungOvaryPlacentaTestisENST00000510894
Transcript ID Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000510894 2.169±0.00 2.283±0.00 3.371±0.00 1.490±0.00 6.782±0.00 3.078±1.01 2.146±0.00 10.830±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001CS CIL_0001CS_0001 CGP 4:52872982-54295272
CIL_0001CL CIL_0001CL_0001 CGP 4:53377643-54295272
CIL_0001CM CIL_0001CM_0001 CGP 4:53459301-54064690
CIL_0007R1 CIL_0007R1_0001 VISTA 4:53715055-54316288
CIL_0008IT CIL_0008IT_0001 VISTA 4:53795831-54396629
CIL_0007J9 CIL_0007J9_0001 UCNEbase 4:54001747-54096419
CIL_0001CN CIL_0001CN_0001 CGP 4:54009789-54102505

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075452 Chic2-001 protein_coding Mus_musculus 0 455
ENSMUST00000162397 Chic2-002 retained_intron Mus_musculus 0 209

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