C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CXXC finger protein 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000511048 CXXC5-002 ENSG00000171604 9606 + 5:139648933-139683593 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000511048
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000511048 2.298±0.00 2.494±0.00 6.585±0.00 3.052±1.90 1.842±0.00 0.414±0.00 2.544±0.00 2.226±0.00 0.752±0.00 4.550±2.08 5.219±0.00 8.636±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000549 CIL_000549_0001 CGP 5:139526431-139683882
CIL_00053Z CIL_00053Z_0001 CGP 5:139647299-139844466

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0004871 IMP signal transducer activity
GO:0005730 IDA nucleolus
GO:0005737 IEA cytoplasm
GO:0007165 IMP signal transduction
GO:0008270 IEA zinc ion binding
GO:0043123 IMP positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000060722 Cxxc5-201 protein_coding Mus_musculus 0 2128

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