C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH3 domain containing ring finger 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000511217 SH3RF2-002 ENSG00000156463 9606 + 5:145937877-146081791 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000511217
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000511217 0.141±0.00 0.103±0.00 0.186±0.02 0.897±0.00 0.673±0.00 0.025±0.00 0.186±0.00 0.298±0.00 3.031±0.00 0.501±0.00 0.042±0.04 1.444±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001AJ CIL_0001AJ_0001 CGP 5:145859733-146081791

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004864 IEA protein phosphatase inhibitor activity
GO:0005515 IPI:IEA protein binding
GO:0008157 IDA protein phosphatase 1 binding
GO:0008270 IEA zinc ion binding
GO:0010923 IDA negative regulation of phosphatase activity
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0019902 IDA phosphatase binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072008 Sh3rf2-001 protein_coding Mus_musculus 0 2119
ENSMUST00000074679 Sh3rf2-002 protein_coding Mus_musculus 0 1195
ENSMUST00000132681 Sh3rf2-003 processed_transcript Mus_musculus 0 689
ENSMUST00000128066 Sh3rf2-004 processed_transcript Mus_musculus 0 359

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