C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 346
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000511834 ZNF346-005 ENSG00000113761 9606 + 5:177022732-177065965 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyOvaryTestisENST00000511834
Transcript ID Brain Kidney Ovary Testis
ENST00000511834 0.649±0.01 0.876±0.35 1.059±0.41 1.850±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000OX CIL_0000OX_0003 CGP 5:176905005-177081189
CIL_0000OR CIL_0000OR_0002 CGP 5:177022696-177098144

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005634 IDA nucleus
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000159278 Zfp346-004 protein_coding Mus_musculus 0 1146
ENSMUST00000161077 Zfp346-009 protein_coding Mus_musculus 0 965
ENSMUST00000021937 Zfp346-001 protein_coding Mus_musculus 0 647
ENSMUST00000160310 Zfp346-010 retained_intron Mus_musculus 0 481
ENSMUST00000162476 Zfp346-003 nonsense_mediated_decay Mus_musculus 0 448
ENSMUST00000159147 Zfp346-002 protein_coding Mus_musculus 0 448
ENSMUST00000162428 Zfp346-012 nonsense_mediated_decay Mus_musculus 0 424
ENSMUST00000160660 Zfp346-008 nonsense_mediated_decay Mus_musculus 0 422
ENSMUST00000161315 Zfp346-007 protein_coding Mus_musculus 0 422
ENSMUST00000161018 Zfp346-006 nonsense_mediated_decay Mus_musculus 0 422
ENSMUST00000161551 Zfp346-013 nonsense_mediated_decay Mus_musculus 0 355
ENSMUST00000162288 Zfp346-005 retained_intron Mus_musculus 0 206

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