C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000476742} | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000513209  |
RP11-834C11.12-001 |
ENSG00000273049 |
9606 | + |
12:53985845-54034888  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0009B4 | CIL_0009B4_0001 | VISTA | 12:53396852-53997557 |
| CIL_0007SU | CIL_0007SU_0001 | VISTA | 12:53718454-54321661 |
| CIL_00084M | CIL_00084M_0001 | VISTA | 12:53732854-54334005 |
| CIL_00003G | CIL_00003G_0001 | CGP | 12:53973126-53990279 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IEA | DNA binding |
| GO:0005634 | IEA | nucleus |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
| GO:0043565 | IEA | sequence-specific DNA binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000174869
|
Hoxc5-002 | processed_transcript | Mus_musculus | 0 | 678 |
|
ENSMUST00000001709
|
Hoxc5-001 | protein_coding | Mus_musculus | 0 | 468 |
|
ENSMUST00000001699
|
Hoxc10-001 | protein_coding | Mus_musculus | 0 | 217 |
|
ENSDART00000057730
|
dbx2-201 | protein_coding | Danio_rerio | 0.00000000001 | 75 |
|
ENSMUST00000114425
|
Hoxa9-002 | protein_coding | Mus_musculus | 0.00000008 | 62 |
|
ENSMUST00000154641
|
Hoxa9-004 | processed_transcript | Mus_musculus | 0.00000008 | 62 |
|
ENSMUST00000048680
|
Hoxa9-001 | protein_coding | Mus_musculus | 0.00000008 | 62 |
