C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: amyloid beta (A4) precursor protein-binding, family B, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000513611 APBB2-006 ENSG00000163697 9606 - 4:40815313-41014385 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LungMusclePlacentaTestisENST00000513611
Transcript ID Lung Muscle Placenta Testis
ENST00000513611 5.182±0.00 1.114±0.13 2.714±1.15 2.115±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038T CIL_00038T_0001 CGP 4:40749897-41216714
CIL_00038S CIL_00038S_0001 CGP 4:40810027-41268455

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000159512 Apbb2-003 protein_coding Mus_musculus 0 3001
ENSMUST00000160870 Apbb2-007 protein_coding Mus_musculus 0 2985
ENSMUST00000162366 Apbb2-008 protein_coding Mus_musculus 0 2963
ENSMUST00000159786 Apbb2-001 protein_coding Mus_musculus 0 1799
ENSMUST00000162349 Apbb2-004 protein_coding Mus_musculus 0 1796
ENSMUST00000087256 Apbb2-201 protein_coding Mus_musculus 0 1773
ENSMUST00000160775 Apbb2-018 processed_transcript Mus_musculus 0 1245
ENSMUST00000162955 Apbb2-002 processed_transcript Mus_musculus 0 1242
ENSMUST00000160185 Apbb2-006 retained_intron Mus_musculus 0 1212
ENSMUST00000162401 Apbb2-005 retained_intron Mus_musculus 0 1192
ENSMUST00000161771 Apbb2-019 processed_transcript Mus_musculus 0 717
ENSMUST00000160063 Apbb2-017 protein_coding Mus_musculus 0 503
ENSMUST00000162382 Apbb2-014 protein_coding Mus_musculus 0 379
ENSMUST00000161879 Apbb2-016 protein_coding Mus_musculus 0 355
ENSMUST00000160103 Apbb2-011 protein_coding Mus_musculus 0 307
ENSMUST00000160054 Apbb2-020 retained_intron Mus_musculus 3.00018e-42 178
ENSMUST00000162994 Apbb2-009 protein_coding Mus_musculus 0.00000009 64

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