C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glyceraldehyde-3-phosphate dehydrogenase pseudogene 60
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000513846 GAPDHP60-001 ENSG00000248180 9606 + 4:87207092-87208086 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLungOvaryTestisENST00000513846
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Lung Ovary Testis
ENST00000513846 0.175±0.00 0.132±0.00 0.256±0.02 0.385±0.00 0.269±0.00 0.324±0.00 0.870±0.00 0.275±0.00 0.199±0.08 0.241±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000BR CIL_0000BR_0001 CGP 4:86935002-87240314
CIL_0000BS CIL_0000BS_0001 CGP 4:87160103-87322906

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000180654 Gm12033-001 processed_pseudogene Mus_musculus 0 1029
ENSMUST00000180167 Gm10359-001 processed_pseudogene Mus_musculus 0 1024
ENSMUST00000119978 Gm12671-001 processed_pseudogene Mus_musculus 0 1024
ENSMUST00000119551 Gm12070-001 processed_pseudogene Mus_musculus 0 1024
ENSMUST00000107041 Gm7336-201 processed_pseudogene Mus_musculus 0 1024
ENSMUST00000073605 Gapdh-201 protein_coding Mus_musculus 0 1024
ENSMUST00000118875 Gapdh-001 protein_coding Mus_musculus 0 1024
ENSMUST00000117757 Gapdh-003 protein_coding Mus_musculus 0 1024
ENSMUST00000100754 Gm2606-001 processed_pseudogene Mus_musculus 0 1018
ENSMUST00000121831 Gm14760-001 processed_pseudogene Mus_musculus 0 1018
ENSMUST00000113842 Gm5138-001 processed_pseudogene Mus_musculus 0 1018
ENSMUST00000119266 Gm12537-001 processed_pseudogene Mus_musculus 0 1018
ENSMUST00000145057 Gm10284-001 processed_pseudogene Mus_musculus 0 1018
ENSMUST00000180755 Gm5559-001 processed_pseudogene Mus_musculus 0 1018
ENSMUST00000181051 Gm2574-001 processed_pseudogene Mus_musculus 0 1018
ENSMUST00000179228 Gm10481-001 processed_pseudogene Mus_musculus 0 1018
ENSMUST00000121658 Gm13394-001 processed_pseudogene Mus_musculus 0 1018
ENSMUST00000166539 Gm2308-001 processed_pseudogene Mus_musculus 0 1014
ENSMUST00000181181 Gm3272-001 processed_pseudogene Mus_musculus 0 1013
ENSMUST00000106443 Gm4609-001 processed_pseudogene Mus_musculus 0 1007
ENSMUST00000180966 Gm20899-001 processed_pseudogene Mus_musculus 0 1007
ENSMUST00000108740 Gm10358-201 processed_pseudogene Mus_musculus 0 1007
ENSMUST00000120014 Gm13292-001 processed_pseudogene Mus_musculus 0 1007
ENSMUST00000182581 Gm4335-001 processed_pseudogene Mus_musculus 0 1003
ENSMUST00000076317 Gm10293-001 processed_pseudogene Mus_musculus 0 1002
ENSMUST00000086739 Gm10566-001 processed_pseudogene Mus_musculus 0 1000
ENSMUST00000077127 Gm3839-201 processed_pseudogene Mus_musculus 0 996
ENSMUST00000181173 Gm3839-001 protein_coding Mus_musculus 0 996
ENSMUST00000120886 Gm13882-001 processed_pseudogene Mus_musculus 0 990
ENSMUST00000182339 Gm4691-001 transcribed_processed_pseudogene Mus_musculus 0 987
ENSMUST00000182989 Gm4691-002 processed_transcript Mus_musculus 0 987
ENSMUST00000119246 Gm12286-001 processed_pseudogene Mus_musculus 0 985
ENSMUST00000181493 Gm3200-001 processed_pseudogene Mus_musculus 0 979
ENSMUST00000182991 Gm4575-001 processed_pseudogene Mus_musculus 0 974
ENSMUST00000105222 Gm10327-001 processed_pseudogene Mus_musculus 0 974
ENSMUST00000094175 Gm10291-201 processed_pseudogene Mus_musculus 0 968
ENSMUST00000071282 Gm3222-201 processed_pseudogene Mus_musculus 0 966
ENSMUST00000182522 Gm3534-001 processed_pseudogene Mus_musculus 0 953
ENSMUST00000087222 Gm3695-001 processed_pseudogene Mus_musculus 0 953
ENSMUST00000121760 Gm5863-001 processed_pseudogene Mus_musculus 0 952
ENSMUST00000099956 Gm8055-001 processed_pseudogene Mus_musculus 0 948
ENSMUST00000091897 Gm5507-001 processed_pseudogene Mus_musculus 0 946
ENSMUST00000120911 Gm12416-001 processed_pseudogene Mus_musculus 0 941
ENSMUST00000182336 Gm5652-001 processed_pseudogene Mus_musculus 0 941
ENSMUST00000119851 Gm14111-001 processed_pseudogene Mus_musculus 0 939
ENSMUST00000089534 Gm7293-201 protein_coding Mus_musculus 0 939
ENSMUST00000118655 Gm12182-001 processed_pseudogene Mus_musculus 0 937
ENSMUST00000182720 Gm8349-001 processed_pseudogene Mus_musculus 0 937
ENSMUST00000182798 Gm2445-001 processed_pseudogene Mus_musculus 0 935
ENSMUST00000183053 Gm7507-001 processed_pseudogene Mus_musculus 0 935
ENSMUST00000180973 Gm3809-001 processed_pseudogene Mus_musculus 0 933
ENSMUST00000182630 Gm2546-001 processed_pseudogene Mus_musculus 0 931
ENSMUST00000122433 Gm14148-001 processed_pseudogene Mus_musculus 0 929
ENSMUST00000117732 Gm11185-001 processed_pseudogene Mus_musculus 0 929
ENSMUST00000120200 Gm11557-001 processed_pseudogene Mus_musculus 0 929
ENSMUST00000050581 Gm5069-002 protein_coding Mus_musculus 0 924
ENSMUST00000182467 Gm6981-001 processed_pseudogene Mus_musculus 0 918
ENSMUST00000182456 Gm16470-001 processed_pseudogene Mus_musculus 0 917
ENSMUST00000118182 Gm5944-001 processed_pseudogene Mus_musculus 0 913
ENSMUST00000182463 Gm3671-001 processed_pseudogene Mus_musculus 0 913
ENSMUST00000117933 Gm15191-001 processed_pseudogene Mus_musculus 0 911
ENSMUST00000119418 Gm13464-001 processed_pseudogene Mus_musculus 0 911
ENSMUST00000182243 Gm4217-001 processed_pseudogene Mus_musculus 0 907
ENSMUST00000182691 Gm7286-001 processed_pseudogene Mus_musculus 0 902
ENSMUST00000182754 Gm8330-001 processed_pseudogene Mus_musculus 0 902
ENSMUST00000118653 Gm8864-001 processed_pseudogene Mus_musculus 0 898
ENSMUST00000183305 Gm4654-001 processed_pseudogene Mus_musculus 0 894
ENSMUST00000183246 Gm2193-001 processed_pseudogene Mus_musculus 0 893
ENSMUST00000182565 Gm8825-001 processed_pseudogene Mus_musculus 0 893
ENSMUST00000117402 Gm7129-001 processed_pseudogene Mus_musculus 0 893
ENSMUST00000182266 Gm2467-001 processed_pseudogene Mus_musculus 0 893
ENSMUST00000082064 Gm6316-001 processed_pseudogene Mus_musculus 0 891
ENSMUST00000095320 Gm10313-001 processed_pseudogene Mus_musculus 0 885
ENSMUST00000183250 Gm8756-001 processed_pseudogene Mus_musculus 0 867
ENSMUST00000122352 Gm11953-001 processed_pseudogene Mus_musculus 0 865
ENSMUST00000182071 Gm9034-001 processed_pseudogene Mus_musculus 0 863
ENSMUST00000133495 3000002C10Rik-001 transcribed_processed_pseudogene Mus_musculus 0 861
ENSMUST00000125451 3000002C10Rik-003 processed_transcript Mus_musculus 0 861
ENSMUST00000144161 3000002C10Rik-002 processed_transcript Mus_musculus 0 861
ENSMUST00000118417 Gm14130-001 processed_pseudogene Mus_musculus 0 861
ENSMUST00000180415 Gm5523-001 processed_pseudogene Mus_musculus 0 856
ENSMUST00000182524 Gm2076-001 processed_pseudogene Mus_musculus 0 856
ENSMUST00000182525 Gm5430-001 processed_pseudogene Mus_musculus 0 856
ENSMUST00000117318 Gm11453-001 processed_pseudogene Mus_musculus 0 852
ENSMUST00000095717 Gm4795-001 processed_pseudogene Mus_musculus 0 848
ENSMUST00000183272 Gapdh-017 protein_coding Mus_musculus 0 848
ENSMUST00000122453 Gm12017-001 processed_pseudogene Mus_musculus 0 843
ENSMUST00000182021 Gm4929-001 processed_pseudogene Mus_musculus 0 843
ENSMUST00000190835 RP24-347J6.3-001 processed_pseudogene Mus_musculus 0 837
ENSMUST00000182596 Gm5732-001 processed_pseudogene Mus_musculus 0 835
ENSMUST00000182150 Gm5210-001 processed_pseudogene Mus_musculus 0 833
ENSMUST00000182724 Gm9149-001 processed_pseudogene Mus_musculus 0 824
ENSMUST00000182599 Gm6967-001 processed_pseudogene Mus_musculus 0 822
ENSMUST00000121506 Gm5270-001 processed_pseudogene Mus_musculus 0 813
ENSMUST00000120913 Gm11658-001 processed_pseudogene Mus_musculus 0 808
ENSMUST00000182995 Gm5335-001 processed_pseudogene Mus_musculus 0 797
ENSMUST00000182346 Gm9081-001 processed_pseudogene Mus_musculus 0 787
ENSMUST00000118148 Gm13592-001 processed_pseudogene Mus_musculus 0 784
ENSMUST00000183329 Gm7985-001 processed_pseudogene Mus_musculus 0 782
ENSMUST00000117317 Gm5187-001 processed_pseudogene Mus_musculus 0 780
ENSMUST00000182757 Gm9658-001 processed_pseudogene Mus_musculus 0 778
ENSMUST00000182707 Gm9061-001 processed_pseudogene Mus_musculus 0 778
ENSMUST00000183049 Gm5787-001 processed_pseudogene Mus_musculus 0 774
ENSMUST00000181978 Gm8927-001 processed_pseudogene Mus_musculus 0 774
ENSMUST00000183259 Gm8565-001 processed_pseudogene Mus_musculus 0 774
ENSMUST00000181413 Gm6498-002 transcribed_processed_pseudogene Mus_musculus 0 773
ENSMUST00000182234 Gm4804-001 processed_pseudogene Mus_musculus 0 773
ENSMUST00000182201 Gm5300-001 processed_pseudogene Mus_musculus 0 765
ENSMUST00000183076 Gm5345-001 processed_pseudogene Mus_musculus 0 763
ENSMUST00000182962 Gm8824-001 processed_pseudogene Mus_musculus 0 761
ENSMUST00000122068 Gm11960-001 transcribed_processed_pseudogene Mus_musculus 0 760
ENSMUST00000181063 Gm11960-002 processed_transcript Mus_musculus 0 760
ENSMUST00000122085 Gm15593-001 processed_pseudogene Mus_musculus 0 758
ENSMUST00000182329 Gm7611-001 processed_pseudogene Mus_musculus 0 756
ENSMUST00000118177 Gm15294-001 translated_processed_pseudogene Mus_musculus 0 749
ENSMUST00000180794 Gm5976-001 processed_pseudogene Mus_musculus 0 747
ENSMUST00000182835 Gm5839-001 processed_pseudogene Mus_musculus 0 745
ENSMUST00000118792 Gm18859-001 processed_pseudogene Mus_musculus 0 737
ENSMUST00000118675 Gm12684-001 processed_pseudogene Mus_musculus 0 734
ENSMUST00000120199 Gm12969-001 processed_pseudogene Mus_musculus 0 732
ENSMUST00000182240 Gm8907-001 processed_pseudogene Mus_musculus 0 732
ENSMUST00000122262 Gm6298-001 processed_pseudogene Mus_musculus 0 732
ENSMUST00000182638 Gm4518-001 processed_pseudogene Mus_musculus 0 728
ENSMUST00000182830 Gm8513-001 processed_pseudogene Mus_musculus 0 726
ENSMUST00000182705 Gm8343-001 processed_pseudogene Mus_musculus 0 717
ENSMUST00000182893 Gm5313-001 processed_pseudogene Mus_musculus 0 717
ENSMUST00000121384 Gm12403-001 processed_pseudogene Mus_musculus 0 717
ENSMUST00000182678 Gm7191-001 processed_pseudogene Mus_musculus 0 713
ENSMUST00000183020 Gm5710-001 processed_pseudogene Mus_musculus 0 708
ENSMUST00000182279 Gm4891-001 processed_pseudogene Mus_musculus 0 708
ENSMUST00000181990 Gm4823-001 processed_pseudogene Mus_musculus 0 708
ENSMUST00000118643 Gm14921-001 processed_pseudogene Mus_musculus 0 708
ENSMUST00000188558 RP23-337B16.2-001 processed_pseudogene Mus_musculus 0 704
ENSMUST00000182716 Gm6771-001 processed_pseudogene Mus_musculus 0 704
ENSMUST00000118688 Gm8661-001 processed_pseudogene Mus_musculus 0 704
ENSMUST00000181982 Gm5342-001 processed_pseudogene Mus_musculus 0 702
ENSMUST00000182254 Gm9146-001 processed_pseudogene Mus_musculus 0 701
ENSMUST00000182941 Gm7583-001 processed_pseudogene Mus_musculus 0 697
ENSMUST00000182235 Gm7745-001 processed_pseudogene Mus_musculus 0 697
ENSMUST00000183159 Gm6317-001 processed_pseudogene Mus_musculus 0 693
ENSMUST00000179088 RP24-347J6.2-001 processed_pseudogene Mus_musculus 0 693
ENSMUST00000188041 RP24-347J6.4-001 processed_pseudogene Mus_musculus 0 691
ENSMUST00000153034 Gm10364-001 transcribed_processed_pseudogene Mus_musculus 0 689
ENSMUST00000076633 Gm10364-002 processed_transcript Mus_musculus 0 689
ENSMUST00000182864 Gm5327-001 processed_pseudogene Mus_musculus 0 689
ENSMUST00000182628 Gm26937-001 processed_pseudogene Mus_musculus 0 688
ENSMUST00000119237 Gm13668-001 processed_pseudogene Mus_musculus 0 686
ENSMUST00000117854 Gm13296-001 processed_pseudogene Mus_musculus 0 686
ENSMUST00000182176 Gm26956-001 processed_pseudogene Mus_musculus 0 682
ENSMUST00000183257 Gm7693-001 processed_pseudogene Mus_musculus 0 676
ENSMUST00000181445 Gm7741-001 processed_pseudogene Mus_musculus 0 675
ENSMUST00000182698 Gm4398-001 processed_pseudogene Mus_musculus 0 671
ENSMUST00000106038 RP24-347J6.6-001 processed_pseudogene Mus_musculus 0 669
ENSMUST00000183173 Gm9423-001 processed_pseudogene Mus_musculus 0 667
ENSMUST00000181525 Gm5706-001 processed_pseudogene Mus_musculus 0 667
ENSMUST00000182882 Gm9211-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000122032 Gm7150-001 processed_pseudogene Mus_musculus 0 656
ENSMUST00000182081 Gm9162-001 processed_pseudogene Mus_musculus 0 649
ENSMUST00000182285 Gm9381-001 processed_pseudogene Mus_musculus 0 645
ENSMUST00000182434 Gm8245-001 processed_pseudogene Mus_musculus 0 638
ENSMUST00000182963 Gm9135-001 processed_pseudogene Mus_musculus 0 638
ENSMUST00000182482 Gm9022-001 transcribed_processed_pseudogene Mus_musculus 0 636
ENSMUST00000183005 Gm8984-001 processed_pseudogene Mus_musculus 0 630
ENSMUST00000182082 Gm8957-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000182857 Gm18822-001 processed_pseudogene Mus_musculus 0 625
ENSMUST00000183205 Gm7627-001 processed_pseudogene Mus_musculus 0 616
ENSMUST00000182945 Gm8955-001 processed_pseudogene Mus_musculus 0 612
ENSMUST00000184486 Gm12117-001 translated_processed_pseudogene Mus_musculus 0 610
ENSMUST00000182028 Gm8919-001 processed_pseudogene Mus_musculus 0 592
ENSMUST00000183151 Gm26977-001 processed_pseudogene Mus_musculus 0 592
ENSMUST00000182057 Gm5350-001 processed_pseudogene Mus_musculus 0 592
ENSMUST00000182472 Gm6114-001 processed_pseudogene Mus_musculus 0 584
ENSMUST00000181607 Gm5974-001 processed_pseudogene Mus_musculus 0 564
ENSMUST00000181115 Gm8357-001 processed_pseudogene Mus_musculus 0 556
ENSMUST00000120570 4930448K20Rik-001 transcribed_processed_pseudogene Mus_musculus 0 551
ENSMUST00000118175 Gm11929-001 processed_pseudogene Mus_musculus 0 540
ENSMUST00000118918 Gm11907-001 processed_pseudogene Mus_musculus 0 534
ENSMUST00000122132 Gm14006-001 processed_pseudogene Mus_musculus 0 532
ENSMUST00000181451 Gm8941-001 processed_pseudogene Mus_musculus 0 529
ENSMUST00000117538 Gm11996-001 processed_pseudogene Mus_musculus 0 523
ENSMUST00000182391 Gm26913-001 processed_pseudogene Mus_musculus 0 520
ENSMUST00000120311 Gm12266-001 processed_pseudogene Mus_musculus 0 516
ENSMUST00000117926 Gm13527-001 processed_pseudogene Mus_musculus 0 507
ENSMUST00000182543 Gm7577-001 processed_pseudogene Mus_musculus 0 503
ENSMUST00000182528 Gm8614-001 processed_pseudogene Mus_musculus 0 494
ENSMUST00000182505 Gm9274-001 processed_pseudogene Mus_musculus 0 494
ENSMUST00000144205 Gapdh-005 processed_transcript Mus_musculus 0 486
ENSMUST00000182302 Gm7132-001 processed_pseudogene Mus_musculus 0 483
ENSMUST00000121399 Gm14113-001 processed_pseudogene Mus_musculus 0 479
ENSMUST00000118477 Gm13501-001 processed_pseudogene Mus_musculus 0 477
ENSMUST00000181461 Gm2383-001 processed_pseudogene Mus_musculus 0 472
ENSMUST00000181201 Gm7713-001 processed_pseudogene Mus_musculus 0 446
ENSMUST00000182096 Gm8601-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000182417 Gm5354-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000182326 Gm8254-001 processed_pseudogene Mus_musculus 0 392
ENSMUST00000190817 RP24-369P14.1-001 processed_pseudogene Mus_musculus 0 387
ENSMUST00000182929 Gm26976-001 processed_pseudogene Mus_musculus 0 387
ENSMUST00000182990 Gm26970-001 processed_pseudogene Mus_musculus 0 381
ENSMUST00000118893 Gm15957-001 processed_pseudogene Mus_musculus 0 361
ENSMUST00000182390 Gm6216-001 processed_pseudogene Mus_musculus 0 357
ENSMUST00000183270 Gm17799-001 processed_pseudogene Mus_musculus 0 348
ENSMUST00000183320 Gm8167-001 processed_pseudogene Mus_musculus 0 337
ENSMUST00000182079 Gm15294-002 protein_coding Mus_musculus 0 337
ENSMUST00000120406 Gm15554-001 processed_pseudogene Mus_musculus 0 329
ENSMUST00000161466 Gm16297-001 processed_pseudogene Mus_musculus 0 322
ENSMUST00000182807 Gm27043-001 processed_pseudogene Mus_musculus 0 315
ENSMUST00000187802 RP24-369P14.2-001 processed_pseudogene Mus_musculus 0 315
ENSMUST00000147954 Gapdh-006 retained_intron Mus_musculus 0 287
ENSMUST00000159905 Gm16296-001 processed_pseudogene Mus_musculus 0 278
ENSMUST00000097296 Gm17199-001 processed_pseudogene Mus_musculus 0 274
ENSMUST00000182783 Gm27005-001 processed_pseudogene Mus_musculus 0 254
ENSMUST00000183172 Gm26963-001 processed_pseudogene Mus_musculus 0 252
ENSMUST00000182372 Gm27023-001 processed_pseudogene Mus_musculus 0 250
ENSMUST00000182115 Gapdh-016 processed_transcript Mus_musculus 0 244
ENSMUST00000182394 Gm9522-001 processed_pseudogene Mus_musculus 0 243
ENSMUST00000119811 Gm7189-001 processed_pseudogene Mus_musculus 0 237
ENSMUST00000182052 Gapdh-011 protein_coding Mus_musculus 0 235
ENSMUST00000117238 Gm13761-001 processed_pseudogene Mus_musculus 1.96182e-44 183
ENSMUST00000118859 Gm12719-001 processed_pseudogene Mus_musculus 4e-37 159
ENSMUST00000182277 Gapdh-010 protein_coding Mus_musculus 6e-35 152
ENSMUST00000163135 Gm17068-001 processed_pseudogene Mus_musculus 1e-32 145
ENSMUST00000182416 Gm3890-001 processed_pseudogene Mus_musculus 1e-32 145
ENSMUST00000118210 Gm11550-001 processed_pseudogene Mus_musculus 2e-29 134
ENSMUST00000183003 Gm27026-001 processed_pseudogene Mus_musculus 5e-21 106
ENSMUST00000186767 RP24-468E2.1-001 unprocessed_pseudogene Mus_musculus 2e-19 100

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