C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000514372 ATP8A1-004 ENSG00000124406 9606 - 4:42408373-42507154 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000514372
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000514372 1.268±0.00 10.320±0.00 0.593±0.00 0.679±0.00 0.525±0.00 1.163±0.00 0.214±0.00 0.471±0.00 1.393±0.00 1.805±1.20 0.247±0.13 0.466±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OI CIL_0007OI_0001 UCNEbase 4:41748045-42425642
CIL_0007YP CIL_0007YP_0001 VISTA 4:41848074-42449047
CIL_0002Z0 CIL_0002Z0_0001 CGP 4:42397839-42657105

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0004012 IEA phospholipid-translocating ATPase activity
GO:0005524 IEA ATP binding
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0045332 IEA phospholipid translocation
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072971 Atp8a1-002 protein_coding Mus_musculus 0 1552
ENSMUST00000037380 Atp8a1-001 protein_coding Mus_musculus 0 1552
ENSMUST00000135930 Atp8a1-003 protein_coding Mus_musculus 0 1371
ENSMUST00000149501 Atp8a1-012 processed_transcript Mus_musculus 0 845
ENSMUST00000155911 Atp8a1-005 retained_intron Mus_musculus 0 265

Loading