C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: membrane-associated ring finger (C3HC4) 3, E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000515241 MARCH3-002 ENSG00000173926 9606 - 5:126914661-126918228 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonLiverLungENST00000515241
Transcript ID Bladder Brain Breast Colon Liver Lung
ENST00000515241 0.407±0.00 0.237±0.00 2.458±0.00 1.774±0.00 0.745±0.00 0.844±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007S2 CIL_0007S2_0001 VISTA 5:126699007-127301374
CIL_00041J CIL_00041J_0001 CGP 5:126776623-127030808
CIL_00041K CIL_00041K_0001 CGP 5:126867714-127073492

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005764 IDA lysosome
GO:0005768 IDA endosome
GO:0006897 IEA endocytosis
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0031410 IEA cytoplasmic vesicle
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000153044 March3-002 retained_intron Mus_musculus 0 784
ENSMUST00000102912 March3-001 protein_coding Mus_musculus 0 710
ENSMUST00000035278 March3-003 protein_coding Mus_musculus 0 638

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