C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: primase and polymerase (DNA-directed)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000515774 PRIMPOL-003 ENSG00000164306 9606 + 4:184649667-184694963 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverOvaryENST00000515774
Transcript ID Brain Heart Kidney Liver Ovary
ENST00000515774 0.496±0.00 0.479±0.00 0.888±0.00 1.318±0.00 0.918±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094W CIL_00094W_0001 VISTA 4:184083896-184687060
CIL_00097G CIL_00097G_0001 VISTA 4:184147184-184748475

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003896 IEA DNA primase activity
GO:0006260 IEA DNA replication
GO:0006269 IEA DNA replication, synthesis of RNA primer

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040468 Primpol-001 protein_coding Mus_musculus 0 688
ENSMUST00000136335 Primpol-003 retained_intron Mus_musculus 0 638
ENSMUST00000125319 Primpol-004 protein_coding Mus_musculus 1.4013e-45 189

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