C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gamma-aminobutyric acid (GABA) A receptor, beta 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000517547 GABRB2-006 ENSG00000145864 9606 - 5:161293898-161546697 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderMuscleENST00000517547
Transcript ID Bladder Muscle
ENST00000517547 0.503±0.00 0.587±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004890 IEA GABA-A receptor activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005886 IEA plasma membrane
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0007165 IEA signal transduction
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0034220 IEA ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000007797 Gabrb2-001 protein_coding Mus_musculus 0 1570
ENSMUST00000136050 Gabrb2-004 processed_transcript Mus_musculus 0 193
ENSMUST00000143626 Gabrb2-002 processed_transcript Mus_musculus 3e-39 167

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