C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: distal-less homeobox 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000518156 DLX6-001 ENSG00000006377 9606 + 7:97005548-97011039 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyMuscleOvaryPlacentaTestisENST00000518156
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Muscle Ovary Placenta Testis
ENST00000518156 0.023±0.00 0.306±0.00 0.522±0.26 0.009±0.00 0.055±0.00 0.021±0.00 0.112±0.02 0.063±0.03 2.618±0.25 1.491±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KR CIL_0007KR_0001 UCNEbase 7:96591845-97012332
CIL_0008VC CIL_0008VC_0001 VISTA 7:96704270-97304991
CIL_0005LA CIL_0005LA_0002 CGP 7:97005548-97025097

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001501 TAS skeletal system development
GO:0003677 IEA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007399 TAS nervous system development
GO:0030326 IEA embryonic limb morphogenesis
GO:0030855 IEA epithelial cell differentiation
GO:0042472 IEA inner ear morphogenesis
GO:0043565 IEA sequence-specific DNA binding
GO:0048646 IEA anatomical structure formation involved in morphogenesis
GO:0050679 IEA positive regulation of epithelial cell proliferation
GO:0060021 IEA palate development
GO:0060322 IEA head development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160937 Dlx6-001 protein_coding Mus_musculus 0 1369
ENSMUST00000171311 Dlx6-201 protein_coding Mus_musculus 0 1343
ENSMUST00000031768 Dlx6-002 protein_coding Mus_musculus 0 676
ENSMUST00000172943 Dlx6-004 retained_intron Mus_musculus 0 359
ENSDART00000102778 dlx6a-001 protein_coding Danio_rerio 5e-19 100

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