C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BCL2/adenovirus E1B 19kDa interacting protein 3-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000518611 BNIP3L-004 ENSG00000104765 9606 + 8:26390362-26411048 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartKidneyLiverLungOvaryPlacentaENST00000518611
Transcript ID Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000518611 7.274±0.00 9.016±0.00 6.604±0.00 5.175±0.00 3.553±0.00 14.200±0.00 15.207±0.00 9.110±0.00 11.518±4.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005TB CIL_0005TB_0002 CGP 8:26291491-26505636

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005521 IDA lamin binding
GO:0005635 IDA nuclear envelope
GO:0005739 IDA mitochondrion
GO:0005740 IEA mitochondrial envelope
GO:0005741 IMP mitochondrial outer membrane
GO:0005783 IDA endoplasmic reticulum
GO:0016021 IEA integral component of membrane
GO:0016032 IEA viral process
GO:0031224 TAS intrinsic component of membrane
GO:0035694 IMP mitochondrial protein catabolic process
GO:0042802 IPI identical protein binding
GO:0042803 IDA protein homodimerization activity
GO:0043065 IDA:IEA positive regulation of apoptotic process
GO:0043066 IDA negative regulation of apoptotic process
GO:0046982 IDA protein heterodimerization activity
GO:0051607 IDA defense response to virus
GO:0097345 IBA mitochondrial outer membrane permeabilization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022634 Bnip3l-002 protein_coding Mus_musculus 0 1229
ENSMUST00000101577 Gm10480-201 processed_pseudogene Mus_musculus 0 1188
ENSMUST00000138160 Bnip3l-007 processed_transcript Mus_musculus 0 800
ENSMUST00000111115 Bnip3l-001 protein_coding Mus_musculus 0 695
ENSMUST00000151059 Bnip3l-004 processed_transcript Mus_musculus 0 568
ENSMUST00000142593 Bnip3l-003 processed_transcript Mus_musculus 0 532
ENSMUST00000135703 Bnip3l-005 processed_transcript Mus_musculus 0 475
ENSMUST00000129605 Bnip3l-006 retained_intron Mus_musculus 0 267

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