C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NACHT and WD repeat domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000518676 NWD1-002 ENSG00000188039 9606 + 19:16719976-16817953 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonHeartKidneyENST00000518676
Transcript ID Adrenal Bladder Breast Colon Heart Kidney
ENST00000518676 0.116±0.00 0.031±0.00 0.066±0.03 0.014±0.00 0.022±0.02 0.128±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006G1 CIL_0006G1_0001 CGP 19:16661127-16817963
CIL_0006G2 CIL_0006G2_0001 CGP 19:16719976-16880353

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000093427 Nwd1-201 protein_coding Mus_musculus 0 2857
ENSMUST00000163026 Nwd1-004 protein_coding Mus_musculus 0 2658
ENSMUST00000160443 Nwd1-007 nonsense_mediated_decay Mus_musculus 0 2654
ENSMUST00000160912 Nwd1-005 protein_coding Mus_musculus 0 2187
ENSMUST00000161557 Nwd1-001 nonsense_mediated_decay Mus_musculus 0 2183
ENSMUST00000161254 Nwd1-002 protein_coding Mus_musculus 0 2023
ENSMUST00000161386 Nwd1-003 protein_coding Mus_musculus 0 1711
ENSMUST00000111336 Sdhc-001 protein_coding Mus_musculus 0.00001 58

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