C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ribosomal protein L30 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000518850  |
RPL30-010 |
ENSG00000156482 |
9606 | - |
8:98041721-98045545  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001KV | CIL_0001KV_0001 | CGP | 8:97775057-98036716 |
| CIL_0001KP | CIL_0001KP_0001 | CGP | 8:98024851-98093610 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003735 | IEA | structural constituent of ribosome |
| GO:0005840 | IEA | ribosome |
| GO:0006412 | IEA | translation |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000140527
|
Rpl30-004 | processed_transcript | Mus_musculus | 0 | 359 |
|
ENSMUST00000079735
|
Rpl30-001 | protein_coding | Mus_musculus | 0 | 355 |
|
ENSMUST00000135417
|
Rpl30-003 | retained_intron | Mus_musculus | 0 | 307 |
|
ENSMUST00000009039
|
Rpl30-002 | protein_coding | Mus_musculus | 0 | 303 |
|
ENSMUST00000122265
|
Rpl30-ps9-001 | processed_pseudogene | Mus_musculus | 0 | 287 |
|
ENSMUST00000142643
|
Rpl30-005 | processed_transcript | Mus_musculus | 0 | 285 |
|
ENSMUST00000118307
|
Gm12191-001 | processed_pseudogene | Mus_musculus | 0 | 281 |
|
ENSMUST00000076166
|
Rpl30-ps8-201 | processed_pseudogene | Mus_musculus | 0 | 281 |
|
ENSMUST00000117119
|
Rpl30-ps10-001 | processed_pseudogene | Mus_musculus | 0 | 279 |
|
ENSMUST00000119767
|
Rpl30-ps1-001 | processed_pseudogene | Mus_musculus | 0 | 276 |
|
ENSMUST00000118664
|
Gm7429-001 | processed_pseudogene | Mus_musculus | 0 | 270 |
|
ENSMUST00000117928
|
Rpl30-ps3-001 | processed_pseudogene | Mus_musculus | 0 | 270 |
|
ENSMUST00000071536
|
Gm6570-201 | processed_pseudogene | Mus_musculus | 0 | 270 |
|
ENSMUST00000096279
|
Gm10343-201 | processed_pseudogene | Mus_musculus | 0 | 270 |
|
ENSMUST00000119573
|
Gm9703-001 | processed_pseudogene | Mus_musculus | 0 | 252 |
|
ENSMUST00000136653
|
Rpl30-006 | retained_intron | Mus_musculus | 0 | 250 |
|
ENSMUST00000160070
|
Rpl30-ps2-001 | processed_pseudogene | Mus_musculus | 0 | 243 |
|
ENSMUST00000119630
|
Rpl30-ps11-001 | processed_pseudogene | Mus_musculus | 0 | 231 |
|
ENSMUST00000122391
|
Gm14530-001 | processed_pseudogene | Mus_musculus | 0 | 226 |
|
ENSMUST00000117104
|
Rpl30-ps5-001 | processed_pseudogene | Mus_musculus | 0 | 193 |
|
ENSMUST00000117313
|
Gm13714-001 | processed_pseudogene | Mus_musculus | 6e-33 | 145 |
|
ENSDART00000052082
|
rpl30-001 | protein_coding | Danio_rerio | 4e-30 | 135 |
