C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: adrenoceptor alpha 1A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000519229 ADRA1A-009 ENSG00000120907 9606 - 8:26756560-26864976 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENST00000519229
Transcript ID Ovary
ENST00000519229 0.028±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005TP CIL_0005TP_0002 CGP 8:26514275-26867273

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0004937 IEA alpha1-adrenergic receptor activity
GO:0005886 IEA plasma membrane
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0016021 IEA integral component of membrane
GO:0019229 IEA regulation of vasoconstriction
GO:0055117 IEA regulation of cardiac muscle contraction
GO:0071875 IEA adrenergic receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000159068 Adra1a-004 protein_coding Mus_musculus 0 1448
ENSMUST00000161339 Adra1a-003 protein_coding Mus_musculus 0 1448
ENSMUST00000054661 Adra1a-002 protein_coding Mus_musculus 0 1448
ENSMUST00000159365 Adra1a-001 protein_coding Mus_musculus 0 1448
ENSMUST00000160647 Adra1a-005 retained_intron Mus_musculus 0 1026

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