C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: poly(A) binding protein, cytoplasmic 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000519622 PABPC1-024 ENSG00000070756 9606 - 8:100709136-100715496 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENST00000519622
Transcript ID Ovary Placenta Testis
ENST00000519622 2453.750±0.00 729.987±0.00 1545.130±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001809 Pabpc1-001 protein_coding Mus_musculus 0 566
ENSMUST00000156793 Pabpc1-006 processed_transcript Mus_musculus 0 518
ENSMUST00000162696 Gm16580-001 processed_pseudogene Mus_musculus 0 501
ENSMUST00000057190 Pabpc6-201 protein_coding Mus_musculus 0 309
ENSMUST00000119625 Gm11693-001 processed_pseudogene Mus_musculus 4e-20 102

Loading