C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ER lipid raft associated 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000519638 ERLIN2-010 ENSG00000147475 9606 + 8:37737566-37754456 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLiverOvaryPlacentaTestisENST00000519638
Transcript ID Bladder Brain Breast Colon Heart Liver Ovary Placenta Testis
ENST00000519638 2.823±0.00 1.375±0.00 1.690±0.00 2.407±0.00 1.452±0.00 2.238±0.00 2.739±0.44 4.581±0.00 5.557±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000802 CIL_000802_0001 VISTA 8:37337791-37938686
CIL_0009C5 CIL_0009C5_0001 VISTA 8:37525567-38127835
CIL_0007QT CIL_0007QT_0001 VISTA 8:37525572-38127829
CIL_0002IU CIL_0002IU_0001 CGP 8:37695751-37759101
CIL_0002IV CIL_0002IV_0001 CGP 8:37736599-37779767

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0005789 IDA endoplasmic reticulum membrane
GO:0008219 IEA cell death
GO:0016021 IEA integral component of membrane
GO:0030433 IDA ER-associated ubiquitin-dependent protein catabolic process
GO:0043234 IDA protein complex
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033873 Erlin2-201 protein_coding Mus_musculus 0 1312

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