C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: general transcription factor IIH, polypeptide 2, 44kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000519783 GTF2H2-002 ENSG00000145736 9606 - 5:71035016-71067601 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartENST00000519783
Transcript ID Heart
ENST00000519783 0.098±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004ZF CIL_0004ZF_0001 CGP 5:70968483-71067689

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000439 IEA core TFIIH complex
GO:0006289 IEA nucleotide-excision repair
GO:0006351 IEA transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000066984 Gtf2h2-001 protein_coding Mus_musculus 0 1321
ENSMUST00000145266 Gtf2h2-003 nonsense_mediated_decay Mus_musculus 0 1317
ENSMUST00000142182 Gtf2h2-004 retained_intron Mus_musculus 0 1140
ENSMUST00000134842 Gtf2h2-002 nonsense_mediated_decay Mus_musculus 0 671
ENSMUST00000124644 Gtf2h2-008 processed_transcript Mus_musculus 0 427
ENSMUST00000066940 Gtf2h2-006 protein_coding Mus_musculus 0 424
ENSMUST00000152049 Gtf2h2-007 processed_transcript Mus_musculus 0 195
ENSMUST00000147229 Gtf2h2-005 retained_intron Mus_musculus 0 195

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