C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | early B-cell factor 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000519890  |
EBF1-005 |
ENSG00000164330 |
9606 | - |
5:158695920-159073794  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007N2 | CIL_0007N2_0001 | UCNEbase | 5:157771686-159082579 |
| CIL_00016F | CIL_00016F_0002 | CGP | 5:157785743-159099761 |
| CIL_00080A | CIL_00080A_0001 | VISTA | 5:158290760-158892059 |
| CIL_0008GW | CIL_0008GW_0001 | VISTA | 5:158416416-159017717 |
| CIL_0008FV | CIL_0008FV_0001 | VISTA | 5:158500688-159102492 |
| CIL_0007UN | CIL_0007UN_0001 | VISTA | 5:158613954-159215603 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000081265
|
Ebf1-001 | protein_coding | Mus_musculus | 0 | 2782 |
|
ENSMUST00000101326
|
Ebf1-002 | protein_coding | Mus_musculus | 0 | 2767 |
|
ENSMUST00000109268
|
Ebf1-003 | protein_coding | Mus_musculus | 0 | 2126 |
|
ENSMUST00000149997
|
Ebf1-005 | processed_transcript | Mus_musculus | 8e-30 | 137 |
|
ENSMUST00000135993
|
Ebf1-006 | processed_transcript | Mus_musculus | 1e-28 | 134 |
|
ENSMUST00000138452
|
Ebf1-007 | processed_transcript | Mus_musculus | 4e-23 | 115 |
