| Transcript ID | Ovary |
|---|---|
| ENST00000519949 | 0.094±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | RAN binding protein 17 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000519949  |
RANBP17-009 |
ENSG00000204764 |
9606 | + |
5:170862018-171300015  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008SG | CIL_0008SG_0001 | VISTA | 5:170690333-171291455 |
| CIL_00098H | CIL_00098H_0001 | VISTA | 5:170731788-171333093 |
| CIL_000977 | CIL_000977_0001 | VISTA | 5:170744249-171345366 |
| CIL_00088M | CIL_00088M_0001 | VISTA | 5:170856489-171457417 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005488 | IEA | binding |
| GO:0005525 | NAS | GTP binding |
| GO:0005643 | NAS | nuclear pore |
| GO:0005737 | IEA | cytoplasm |
| GO:0006606 | NAS | protein import into nucleus |
| GO:0006886 | IEA | intracellular protein transport |
| GO:0008536 | IEA | Ran GTPase binding |
| GO:0051028 | IEA | mRNA transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000129179
|
Ranbp17-002 | nonsense_mediated_decay | Mus_musculus | 0 | 2961 |
|
ENSMUST00000102815
|
Ranbp17-001 | protein_coding | Mus_musculus | 0 | 2193 |
|
ENSMUST00000037522
|
Ranbp17-003 | protein_coding | Mus_musculus | 0 | 1808 |
|
ENSMUST00000147751
|
Ranbp17-005 | protein_coding | Mus_musculus | 0 | 800 |
|
ENSMUST00000154808
|
Ranbp17-004 | processed_transcript | Mus_musculus | 0 | 566 |
