C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | nucleophosmin (nucleolar phosphoprotein B23, numatrin) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000519955  |
NPM1-011 |
ENSG00000181163 |
9606 | + |
5:171400786-171405732  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00088M | CIL_00088M_0001 | VISTA | 5:170856489-171457417 |
| CIL_00097F | CIL_00097F_0001 | VISTA | 5:170900986-171503014 |
| CIL_00092S | CIL_00092S_0001 | VISTA | 5:171022159-171623481 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000109354
|
Npm1-002 | protein_coding | Mus_musculus | 0 | 259 |
|
ENSMUST00000075641
|
Npm1-001 | protein_coding | Mus_musculus | 0 | 259 |
|
ENSMUST00000101375
|
Npm1-003 | protein_coding | Mus_musculus | 0 | 257 |
|
ENSMUST00000118047
|
Gm14681-001 | processed_pseudogene | Mus_musculus | 0 | 254 |
|
ENSMUST00000164523
|
Gm5611-201 | protein_coding | Mus_musculus | 0 | 243 |
|
ENSMUST00000118871
|
Gm15484-001 | processed_pseudogene | Mus_musculus | 0 | 233 |
|
ENSMUST00000146759
|
Npm1-005 | processed_transcript | Mus_musculus | 0 | 215 |
|
ENSMUST00000172394
|
Gm17060-001 | processed_pseudogene | Mus_musculus | 0 | 191 |
|
ENSMUST00000168993
|
Gm7289-001 | processed_pseudogene | Mus_musculus | 4.06377e-44 | 182 |
|
ENSMUST00000093201
|
Npm1-006 | protein_coding | Mus_musculus | 3e-40 | 169 |
|
ENSMUST00000117205
|
Gm13423-001 | processed_pseudogene | Mus_musculus | 2e-22 | 110 |
|
ENSMUST00000121029
|
Gm14776-001 | processed_pseudogene | Mus_musculus | 2e-18 | 97 |
