C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gamma-aminobutyric acid (GABA) A receptor, pi
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000521009 GABRP-008 ENSG00000094755 9606 + 5:170764294-170795244 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000521009
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000521009 0.743±0.00 2.121±0.00 4.757±0.00 1.378±0.00 1.367±0.00 5.301±0.00 2.404±0.00 1.925±0.00 0.328±0.00 2.605±0.81 0.286±0.00 2.424±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SG CIL_0008SG_0001 VISTA 5:170690333-171291455
CIL_00098H CIL_00098H_0001 VISTA 5:170731788-171333093
CIL_000977 CIL_000977_0001 VISTA 5:170744249-171345366

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004890 IEA GABA-A receptor activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0007165 IEA signal transduction
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0034220 IEA ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020366 Gabrp-001 protein_coding Mus_musculus 0 368

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