C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) pseudogene 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000522430 ST13P6-001 ENSG00000225259 9606 + 8:133408006-133409107 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000522430
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000522430 0.049±0.00 0.079±0.00 0.027±0.00 0.108±0.00 0.130±0.06 0.032±0.02 0.027±0.00 0.099±0.06 0.071±0.00 0.034±0.01 0.061±0.00 0.029±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094T CIL_00094T_0001 VISTA 8:133226403-133828417
CIL_0004PW CIL_0004PW_0001 CGP 8:133237171-133571940
CIL_0008CD CIL_0008CD_0001 VISTA 8:133368805-133970973

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172107 St13-001 protein_coding Mus_musculus 0 1317
ENSMUST00000023039 St13-004 protein_coding Mus_musculus 0 1203
ENSMUST00000163382 St13-003 protein_coding Mus_musculus 0 255

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