C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho guanine nucleotide exchange factor (GEF) 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000522435 ARHGEF10-004 ENSG00000104728 9606 + 8:1882656-1958639 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000522435
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000522435 1.767±0.00 4.196±0.00 2.283±0.00 2.292±0.00 0.897±0.76 0.152±0.00 2.022±0.00 0.329±0.22 1.825±0.26 0.749±0.00 2.123±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007GL CIL_0007GL_0002 CGP 8:1755778-1958641
CIL_0000LF CIL_0000LF_0001 CGP 8:1823976-2006936

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005515 IEA protein binding
GO:0032321 IEA positive regulation of Rho GTPase activity
GO:0035023 IEA regulation of Rho protein signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163062 Arhgef10-007 protein_coding Mus_musculus 0 2134
ENSMUST00000110800 Arhgef10-002 protein_coding Mus_musculus 0 1389
ENSMUST00000084207 Arhgef10-001 protein_coding Mus_musculus 0 1389
ENSMUST00000161162 Arhgef10-003 protein_coding Mus_musculus 0 721

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