C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: GTPase activating protein (SH3 domain) binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000522761 G3BP1-005 ENSG00000145907 9606 + 5:151771924-151804225 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeTestisENST00000522761
Transcript ID Adipose Testis
ENST00000522761 17.712±0.00 20.066±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007IC CIL_0007IC_0002 CGP 5:151661096-151772532
CIL_0001U9 CIL_0001U9_0001 CGP 5:151771045-151924842

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0006810 IEA transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018727 G3bp1-001 protein_coding Mus_musculus 0 970
ENSMUST00000119397 Gm5913-001 processed_pseudogene Mus_musculus 0 907
ENSMUST00000121476 Gm7405-001 processed_pseudogene Mus_musculus 0 320
ENSMUST00000121311 Gm14896-001 processed_pseudogene Mus_musculus 0 283
ENSMUST00000151790 G3bp1-002 processed_transcript Mus_musculus 1e-33 148

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