C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000523800 CTD-2544L4.1-001 ENSG00000253107 9606 + 8:110555408-110556518 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartENST00000523800
Transcript ID Brain Heart
ENST00000523800 0.033±0.00 0.021±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005RS CIL_0005RS_0001 CGP 8:109963645-113437099

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160186 Atxn3-005 nonsense_mediated_decay Mus_musculus 1e-31 141
ENSMUST00000021606 Atxn3-001 protein_coding Mus_musculus 5e-21 106
ENSMUST00000160251 Atxn3-003 protein_coding Mus_musculus 0 551
ENSMUST00000161011 Atxn3-002 protein_coding Mus_musculus 0 571
ENSMUST00000159883 Atxn3-004 protein_coding Mus_musculus 0 556

Loading