C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: matrilin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000524308 MATN2-002 ENSG00000132561 9606 + 8:97869111-98036210 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000524308
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000524308 4.840±0.00 10.152±0.00 3.678±0.00 11.771±0.00 5.504±3.96 1.221±0.76 4.904±3.84 1.066±0.00 4.107±2.64 0.396±0.00 19.374±5.65 14.743±3.54 33.758±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001KV CIL_0001KV_0001 CGP 8:97775057-98036716

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005509 IEA calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005578 NAS proteinaceous extracellular matrix
GO:0008150 ND biological_process
GO:0031012 IDA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163455 Matn2-202 protein_coding Mus_musculus 0 2030
ENSMUST00000022947 Matn2-201 protein_coding Mus_musculus 0 1653

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