C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000525966 RP11-677N16.1-001 ENSG00000255040 9606 - 11:14673606-14674555 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyLiverTestisENST00000525966
Transcript ID Brain Breast Colon Kidney Liver Testis
ENST00000525966 0.037±0.00 0.012±0.00 0.011±0.00 0.087±0.00 0.077±0.00 0.131±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ZT CIL_0003ZT_0001 CGP 11:14504874-14872044
CIL_0003ZS CIL_0003ZS_0001 CGP 11:14643723-14892252

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000155839 Gm4835-001 processed_pseudogene Mus_musculus 0 1122
ENSMUST00000034916 Gm5564-201 processed_pseudogene Mus_musculus 0 1110
ENSMUST00000169860 Morf4l1-001 protein_coding Mus_musculus 0 1094
ENSMUST00000121546 Gm12807-001 processed_pseudogene Mus_musculus 0 1031
ENSMUST00000085248 Morf4l1-002 protein_coding Mus_musculus 0 896
ENSMUST00000187771 Morf4l1-013 processed_transcript Mus_musculus 0 817
ENSMUST00000191189 Morf4l1-014 protein_coding Mus_musculus 0 713
ENSMUST00000190377 Morf4l1-004 retained_intron Mus_musculus 0 673
ENSMUST00000188905 Morf4l1-012 processed_transcript Mus_musculus 0 355
ENSMUST00000189241 Morf4l1-010 retained_intron Mus_musculus 0 300
ENSMUST00000191353 Morf4l1-009 protein_coding Mus_musculus 0 296
ENSMUST00000162836 Gm7420-001 processed_pseudogene Mus_musculus 0 217
ENSMUST00000189420 Morf4l1-006 retained_intron Mus_musculus 3e-37 159
ENSMUST00000185433 Morf4l1-003 retained_intron Mus_musculus 1e-17 95

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