C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylserine synthase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000527325 PTDSS2-007 ENSG00000174915 9606 + 11:487239-489730 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonKidneyOvaryPlacentaTestisENST00000527325
Transcript ID Bladder Colon Kidney Ovary Placenta Testis
ENST00000527325 1.601±0.00 0.851±0.00 0.895±0.00 11.677±0.00 6.388±0.00 43.993±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002UP CIL_0002UP_0001 CGP 11:417933-491399
CIL_0003OS CIL_0003OS_0001 CGP 11:448268-507300

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026568 Ptdss2-001 protein_coding Mus_musculus 0 798
ENSMUST00000174373 Ptdss2-006 nonsense_mediated_decay Mus_musculus 0 569
ENSMUST00000174706 Ptdss2-002 retained_intron Mus_musculus 0 429
ENSMUST00000172787 Ptdss2-003 protein_coding Mus_musculus 0 267

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