C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: poly-U binding splicing factor 60KDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000527584 PUF60-019 ENSG00000179950 9606 - 8:143818373-143824460 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENST00000527584
Transcript ID Bladder
ENST00000527584 1.719±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008C2 CIL_0008C2_0001 VISTA 8:143231340-143832399
CIL_0002GT CIL_0002GT_0001 CGP 8:143790920-143829859
CIL_0006FY CIL_0006FY_0002 CGP 8:143816344-143840974

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100527 Puf60-202 protein_coding Mus_musculus 0 671
ENSMUST00000002599 Puf60-201 protein_coding Mus_musculus 0 381
ENSDART00000038487 puf60b-001 protein_coding Danio_rerio 0 374

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