C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polycystic kidney disease 1-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000527937 PKD1L2-007 ENSG00000166473 9606 - 16:81171215-81181327 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonKidneyLiverMuscleOvaryPlacentaTestisENST00000527937
Transcript ID Adrenal Brain Colon Kidney Liver Muscle Ovary Placenta Testis
ENST00000527937 0.079±0.00 0.047±0.00 0.058±0.03 0.110±0.05 0.095±0.05 0.056±0.00 0.054±0.04 0.086±0.00 0.145±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043F CIL_00043F_0001 CGP 16:81081961-81181213

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0006811 IEA ion transport
GO:0007218 IEA neuropeptide signaling pathway
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.00002 57

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