C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Nanog homeobox pseudogene 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000528386 NANOGP8-001 ENSG00000255192 9606 - 15:35084195-35085110 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastHeartKidneyLiverOvaryPlacentaTestisENST00000528386
Transcript ID Bladder Breast Heart Kidney Liver Ovary Placenta Testis
ENST00000528386 0.107±0.00 0.278±0.00 0.098±0.00 0.069±0.00 0.152±0.00 0.382±0.00 0.041±0.00 0.316±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VH CIL_0008VH_0001 VISTA 15:34591431-35191947
CIL_0008IU CIL_0008IU_0001 VISTA 15:34953121-35554645
CIL_0006HH CIL_0006HH_0001 CGP 15:34978341-35546193

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000012540 Nanog-001 protein_coding Mus_musculus 0 294
ENSMUST00000112580 Nanog-002 protein_coding Mus_musculus 0 294
ENSMUST00000112581 Nanog-003 protein_coding Mus_musculus 0 294

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